Compare commits
2 Commits
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39b3570e11
Author | SHA1 | Date |
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Richard Wong | 39b3570e11 | |
Richard Wong | 7b875ba141 |
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output/north
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output/random_regular
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output/rome
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output/scale_free
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output/steinlib
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#!/bin/bash
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FILE_LIST=$1
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PROGRAM=$2
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ARGS=$3
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THREADS=11
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cat $FILE_LIST | parallel -k --jobs $THREADS "./$PROGRAM {} $ARGS"
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../../deferred_planarity_test/bin/dpt_planarizer
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../make_planar/bin/get_graph_characteristics
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.10.19.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.10.20.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.10.22.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.10.25.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.10.27.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.10.29.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.10.30.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.10.31.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.10.34.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.10.38.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.10.41.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.10.46.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.10.61.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.10.62.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.10.79.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.10.80.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.10.82.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.10.85.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.10.86.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.10.88.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.10.94.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.100.0.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.100.1.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.11.16.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.11.17.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.11.23.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.11.25.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.11.29.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.11.71.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.11.72.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.12.107.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.12.108.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.12.111.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.12.112.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.12.118.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.12.121.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.12.145.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.12.22.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.12.31.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.12.40.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.12.60.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.12.62.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.12.63.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.12.75.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.12.76.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.12.77.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.12.78.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.12.79.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.12.88.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.12.91.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.12.98.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.13.117.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.13.34.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.13.48.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.13.49.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.13.51.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.13.52.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.13.53.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.13.54.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.13.63.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.13.79.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.13.86.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.13.94.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.13.95.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.13.99.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.14.20.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.14.21.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.14.22.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.14.23.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.14.24.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.14.25.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.14.26.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.14.27.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.14.28.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.14.33.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.14.34.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.14.38.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.14.57.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.14.58.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.14.62.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.15.22.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.15.23.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.15.28.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.15.29.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.15.40.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.15.41.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.16.31.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.16.36.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.16.60.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.16.63.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.16.64.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.16.66.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.16.9.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.16.91.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.17.10.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.17.30.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.17.34.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.17.40.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.17.41.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.18.1.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.18.21.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.18.22.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.18.24.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.18.30.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.18.38.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.19.7.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.20.1.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.20.14.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.20.41.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.20.45.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.20.46.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.20.47.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.20.48.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.20.49.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.20.50.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.20.6.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.21.1.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.21.10.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.21.15.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.21.27.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.21.33.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.21.35.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.21.37.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.21.41.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.22.31.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.22.35.gml
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/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/g.22.49.gml
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||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-24.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-25.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-26.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-27.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-28.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-29.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-30.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-31.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-33.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-34.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-36.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-37.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-38.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-39.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-41.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-42.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-45.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-48.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-49.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-50.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-52.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-53.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-55.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-56.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-60.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-62.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-64.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-66.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-67.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-69.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-70.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-71.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-73.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-74.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-75.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-76.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-78.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-79.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-80.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-83.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-84.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-85.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-86.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-88.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-91.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-92.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-94.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-95.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-96.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-98.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp3-99.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-11.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-13.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-14.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-15.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-16.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-17.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-18.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-19.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-21.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-22.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-23.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-24.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-25.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-26.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-27.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-28.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-29.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-30.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-31.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-32.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-33.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-34.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-35.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-36.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-37.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-38.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-39.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-40.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-41.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-42.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-43.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-44.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-45.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-46.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-47.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-48.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-49.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-50.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-51.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-52.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-53.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-54.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-55.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-56.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-58.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-59.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-60.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-61.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-62.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-63.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-64.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-66.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-67.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-68.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-69.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-70.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-71.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-72.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-73.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-74.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-75.gml
|
||||
/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/steinlib/gml_non_planar/wrp4-76.gml
|
|
@ -1,7 +0,0 @@
|
|||
dpt_planarizer
|
||||
north.txt
|
||||
north_result.csv
|
||||
north_subset.txt
|
||||
ogdf_mps_fast
|
||||
output_north_dfs.txt
|
||||
output_north_fast.txt
|
|
@ -1,33 +0,0 @@
|
|||
#!/bin/bash
|
||||
|
||||
FILE_LIST=$1
|
||||
|
||||
PROGRAM=$2
|
||||
|
||||
|
||||
# Check if file_list.txt exists
|
||||
if [ ! -f $FILE_LIST ]; then
|
||||
echo "input file not found!"
|
||||
exit 1
|
||||
fi
|
||||
|
||||
INPUT_PATH=/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/north/gml_non_planar/
|
||||
|
||||
# Read file paths from file_list.txt
|
||||
while IFS= read -r INPUT_FILE; do
|
||||
# Extract filename stem
|
||||
filename=$(basename -- "$INPUT_FILE")
|
||||
filename_stem="${filename%.*}"
|
||||
|
||||
|
||||
# Run your program and capture its output
|
||||
if [ "$PROGRAM" == "ogdf_mps_fast" ]; then
|
||||
# do something if strings are equal
|
||||
./$PROGRAM "$INPUT_PATH$INPUT_FILE"
|
||||
elif [ "$PROGRAM" == "dpt_planarizer" ]; then
|
||||
# do something if strings are not equal
|
||||
./$PROGRAM "$INPUT_PATH$INPUT_FILE" 1000
|
||||
fi
|
||||
|
||||
|
||||
done < $FILE_LIST
|
|
@ -0,0 +1 @@
|
|||
../make_planar/bin/ogdf_mps_cactus
|
|
@ -0,0 +1 @@
|
|||
../make_planar/bin/ogdf_mps_fast
|
|
@ -1,6 +0,0 @@
|
|||
dpt_planarizer
|
||||
ogdf_mps_fast
|
||||
output_rome_dfs.txt
|
||||
output_rome_fast.txt
|
||||
rome.txt
|
||||
rome_result.csv
|
|
@ -1,33 +0,0 @@
|
|||
#!/bin/bash
|
||||
|
||||
FILE_LIST=$1
|
||||
|
||||
PROGRAM=$2
|
||||
|
||||
|
||||
# Check if file_list.txt exists
|
||||
if [ ! -f $FILE_LIST ]; then
|
||||
echo "input file not found!"
|
||||
exit 1
|
||||
fi
|
||||
|
||||
INPUT_PATH=/home/richard/Projects/06_research/maximum_planar_subgraph/benchmark_data/graph_datasets/rome/gml_non_planar/
|
||||
|
||||
# Read file paths from file_list.txt
|
||||
while IFS= read -r INPUT_FILE; do
|
||||
# Extract filename stem
|
||||
filename=$(basename -- "$INPUT_FILE")
|
||||
filename_stem="${filename%.*}"
|
||||
|
||||
|
||||
# Run your program and capture its output
|
||||
if [ "$PROGRAM" == "ogdf_mps_fast" ]; then
|
||||
# do something if strings are equal
|
||||
./$PROGRAM "$INPUT_PATH$INPUT_FILE"
|
||||
elif [ "$PROGRAM" == "dpt_planarizer" ]; then
|
||||
# do something if strings are not equal
|
||||
./$PROGRAM "$INPUT_PATH$INPUT_FILE" 1000
|
||||
fi
|
||||
|
||||
|
||||
done < $FILE_LIST
|
|
@ -0,0 +1,33 @@
|
|||
#!/bin/bash
|
||||
|
||||
NUM_CYCLES=1000
|
||||
|
||||
TYPE=$1
|
||||
|
||||
start_time=$(date +%s.%N)
|
||||
echo "running $TYPE: dfs"
|
||||
bash benchmark.bash input/$TYPE.txt dpt_planarizer $NUM_CYCLES > output/$TYPE/dfs.csv
|
||||
end_time=$(date +%s.%N)
|
||||
elapsed_time=$(echo "$end_time - $start_time" | bc)
|
||||
echo "Elapsed time: $elapsed_time seconds"
|
||||
echo ""
|
||||
|
||||
echo "running $TYPE: cactus"
|
||||
start_time=$(date +%s.%N)
|
||||
bash benchmark.bash input/$TYPE.txt ogdf_mps_cactus > output/$TYPE/cactus.csv
|
||||
end_time=$(date +%s.%N)
|
||||
elapsed_time=$(echo "$end_time - $start_time" | bc)
|
||||
echo "Elapsed time: $elapsed_time seconds"
|
||||
echo ""
|
||||
|
||||
echo "running $TYPE: fast"
|
||||
start_time=$(date +%s.%N)
|
||||
bash benchmark.bash input/$TYPE.txt ogdf_mps_fast > output/$TYPE/fast.csv
|
||||
end_time=$(date +%s.%N)
|
||||
elapsed_time=$(echo "$end_time - $start_time" | bc)
|
||||
echo "Elapsed time: $elapsed_time seconds"
|
||||
echo ""
|
||||
|
||||
echo "getting propreties..."
|
||||
bash benchmark.bash input/$TYPE.txt get_graph_characteristics > output/$TYPE/graph_properties.csv
|
||||
echo "done"
|
|
@ -1,9 +0,0 @@
|
|||
benchmark_steinlib.bash
|
||||
dpt_planarizer
|
||||
dpt_planarizer_random
|
||||
dpt_planarizer_wilson
|
||||
get_graph_char
|
||||
ogdf_mps_cactus
|
||||
ogdf_mps_fast
|
||||
output_steinlib_*
|
||||
steinlib.txt
|
|
@ -0,0 +1,27 @@
|
|||
#include <ogdf/basic/basic.h>
|
||||
#include <ogdf/basic/Graph.h>
|
||||
#include <ogdf/fileformats/GraphIO.h>
|
||||
#include <ogdf/basic/graph_generators.h>
|
||||
|
||||
using namespace ogdf;
|
||||
|
||||
int main(int argc, char **argv) {
|
||||
int nodeCount = std::stoi(argv[1]);
|
||||
int edgeCount = std::stoi(argv[2]);
|
||||
int copies = std::stoi(argv[3]);
|
||||
int seed = std::stoi(argv[4]);
|
||||
std::string outputFolder = argv[5];
|
||||
|
||||
setSeed(seed);
|
||||
for (int i = 0; i < copies; i++) {
|
||||
Graph G;
|
||||
randomRegularGraph(G, nodeCount, edgeCount);
|
||||
|
||||
std::stringstream ss;
|
||||
ss << outputFolder << "/graphn" << nodeCount << "e" << edgeCount << "s"
|
||||
<< seed << "i" << i << ".gml";
|
||||
std::string s = ss.str();
|
||||
GraphIO::write(G, s, GraphIO::writeGML);
|
||||
}
|
||||
|
||||
}
|
|
@ -0,0 +1,27 @@
|
|||
#include <ogdf/basic/basic.h>
|
||||
#include <ogdf/basic/Graph.h>
|
||||
#include <ogdf/fileformats/GraphIO.h>
|
||||
#include <ogdf/basic/graph_generators.h>
|
||||
|
||||
using namespace ogdf;
|
||||
|
||||
int main(int argc, char **argv) {
|
||||
int nodeCount = std::stoi(argv[1]);
|
||||
int edgeCount = std::stoi(argv[2]);
|
||||
int copies = std::stoi(argv[3]);
|
||||
int seed = std::stoi(argv[4]);
|
||||
std::string outputFolder = argv[5];
|
||||
|
||||
setSeed(seed);
|
||||
for (int i = 0; i < copies; i++) {
|
||||
Graph G;
|
||||
preferentialAttachmentGraph(G, nodeCount, edgeCount);
|
||||
|
||||
std::stringstream ss;
|
||||
ss << outputFolder << "/graphn" << nodeCount << "e" << edgeCount << "s"
|
||||
<< seed << "i" << i << ".gml";
|
||||
std::string s = ss.str();
|
||||
GraphIO::write(G, s, GraphIO::writeGML);
|
||||
}
|
||||
|
||||
}
|
|
@ -0,0 +1,18 @@
|
|||
#!/bin/bash
|
||||
|
||||
g++ ogdf_mps_cactus.cpp -lOGDF -lCOIN -o bin/ogdf_mps_cactus -O3 -march=native -Wall
|
||||
|
||||
echo "built ogdf_mps_cactus"
|
||||
|
||||
g++ ogdf_mps_fast.cpp -lOGDF -lCOIN -o bin/ogdf_mps_fast -O3 -march=native -Wall
|
||||
|
||||
echo "built ogdf_mps_fast"
|
||||
|
||||
g++ ogdf_mps_exact.cpp -lOGDF -lCOIN -o bin/ogdf_mps_exact -O3 -march=native -Wall
|
||||
|
||||
echo "built ogdf_mps_exact"
|
||||
|
||||
g++ get_graph_characteristics.cpp -lOGDF -lCOIN -o bin/get_graph_characteristics -O3 -march=native -Wall
|
||||
|
||||
echo "built get_graph_characteristics"
|
||||
|
|
@ -1,8 +1,8 @@
|
|||
/* This code converts GraphML to gml
|
||||
/* get number of nodes and edge of graph
|
||||
*
|
||||
*/
|
||||
#include <ogdf/fileformats/GraphIO.h>
|
||||
|
||||
#include <filesystem>
|
||||
#include <iostream>
|
||||
|
||||
using namespace ogdf;
|
||||
|
@ -18,8 +18,8 @@ int main(int argc, char* argv[])
|
|||
std::cerr << "Could not read input.gml" << std::endl;
|
||||
return 1;
|
||||
}
|
||||
|
||||
std::cout << G.numberOfNodes() << ", " << G.numberOfEdges() << std::endl;
|
||||
string filename = std::filesystem::path(input_file).stem();
|
||||
std::cout << filename << ", " << G.numberOfNodes() << ", " << G.numberOfEdges() << std::endl;
|
||||
|
||||
|
||||
return 0;
|
||||
|
|
|
@ -1,11 +1,13 @@
|
|||
#include <ogdf/basic/STNumbering.h>
|
||||
#include <ogdf/fileformats/GraphIO.h>
|
||||
/* Maximum Planar Subgraph by cactus
|
||||
*
|
||||
*/
|
||||
|
||||
// #include <ogdf/planarity/PlanarSubgraphBoyerMyrvold.h>
|
||||
#include <ogdf/fileformats/GraphIO.h>
|
||||
#include <ogdf/planarity/MaximumPlanarSubgraph.h>
|
||||
#include <ogdf/planarity/PlanarSubgraphCactus.h>
|
||||
#include <ogdf/planarity/MaximalPlanarSubgraphSimple.h>
|
||||
|
||||
#include <filesystem>
|
||||
#include <chrono>
|
||||
#include <iostream>
|
||||
|
||||
using namespace ogdf;
|
||||
|
@ -14,54 +16,38 @@ using namespace ogdf;
|
|||
int main(int argc, char* argv[])
|
||||
{
|
||||
|
||||
string inputFile = argv[1];
|
||||
string input_file = argv[1];
|
||||
Graph G;
|
||||
|
||||
if (!GraphIO::read(G, inputFile, GraphIO::readGML)) {
|
||||
if (!GraphIO::read(G, input_file, GraphIO::readGML)) {
|
||||
std::cerr << "Could not read input.gml" << std::endl;
|
||||
return 1;
|
||||
}
|
||||
|
||||
|
||||
NodeArray<int> numbering(G);
|
||||
computeSTNumbering(G, numbering, nullptr, nullptr, true);
|
||||
OGDF_ASSERT(num == G.numberOfNodes());
|
||||
// --------------------------------
|
||||
// planarize
|
||||
// --------------------------------
|
||||
|
||||
// print after input
|
||||
// graphPrinter(G);
|
||||
// std::cout << "G Planarity: " << ogdf::isPlanar(G) << std::endl;
|
||||
// std::cout << "Original number of nodes: " << G.numberOfNodes() << std::endl;
|
||||
// std::cout << "Original number of edges: " << G.numberOfEdges() << std::endl;
|
||||
|
||||
// separator for planarization
|
||||
// <-------------->
|
||||
|
||||
// std::cout << "start planarization" << std::endl;
|
||||
List<edge> *delEdges = new List<edge>; // empty list
|
||||
|
||||
auto start = std::chrono::high_resolution_clock::now();
|
||||
|
||||
// compute a cactus, then compute edge addition
|
||||
PlanarSubgraphCactus<int> psc;
|
||||
ogdf::MaximalPlanarSubgraphSimple<int> mps(psc);
|
||||
mps.call(G, *delEdges);
|
||||
|
||||
|
||||
std::cout << delEdges->size() << std::endl;
|
||||
auto end = std::chrono::high_resolution_clock::now();
|
||||
auto microseconds = std::chrono::duration_cast<std::chrono::microseconds>(end - start).count();
|
||||
double time = static_cast<double>(microseconds) / 1'000'000.0;
|
||||
|
||||
// --------------------------------
|
||||
// print out result of planarization
|
||||
// --------------------------------
|
||||
|
||||
// delete removed edges
|
||||
//for (edge e: *delEdges) {
|
||||
// // print removed edges
|
||||
// // std::cout << e->adjSource() << std::endl;
|
||||
// G.delEdge(e);
|
||||
//}
|
||||
|
||||
|
||||
// write processed graph to new gml file
|
||||
// GraphIO::write(G, "output.gml", GraphIO::writeGML);
|
||||
|
||||
|
||||
// std::cout << ogdf::isPlanar(G) << std::endl;
|
||||
// std::cout << "Original number of nodes: " << G.numberOfNodes() << std::endl;
|
||||
// std::cout << "Subgraph number of edges: " << G.numberOfEdges() << std::endl;
|
||||
int removed_edges = delEdges->size();
|
||||
string filename = std::filesystem::path(input_file).stem();
|
||||
std::cout << filename << ", " << removed_edges << ", " << time << std::endl;
|
||||
|
||||
|
||||
return 0;
|
||||
|
|
|
@ -1,17 +1,12 @@
|
|||
#include <ogdf/basic/STNumbering.h>
|
||||
/* Maximum Planar Subgraph by Integer Linear Program (ILP)
|
||||
*
|
||||
*/
|
||||
|
||||
#include <ogdf/fileformats/GraphIO.h>
|
||||
// #include <ogdf/basic/extended_graph_alg.h>
|
||||
|
||||
#include <ogdf/planarity/PlanarSubgraphFast.h>
|
||||
#include <ogdf/planarity/PlanarSubgraphBoyerMyrvold.h>
|
||||
#include <ogdf/planarity/PlanarSubgraphPC.h>
|
||||
#include <ogdf/planarity/MaximumPlanarSubgraph.h>
|
||||
#include <ogdf/planarity/MaximalPlanarSubgraphSimple.h>
|
||||
|
||||
#include <filesystem>
|
||||
#include <iostream>
|
||||
#include <map>
|
||||
#include <chrono>
|
||||
#include <getopt.h>
|
||||
|
||||
using namespace ogdf;
|
||||
|
||||
|
@ -19,52 +14,40 @@ using namespace ogdf;
|
|||
int main(int argc, char* argv[])
|
||||
{
|
||||
|
||||
string inputFile = argv[1];
|
||||
string input_file = argv[1];
|
||||
Graph G;
|
||||
|
||||
if (!GraphIO::read(G, inputFile, GraphIO::readGML)) {
|
||||
if (!GraphIO::read(G, input_file, GraphIO::readGML)) {
|
||||
std::cerr << "Could not read input.gml" << std::endl;
|
||||
return 1;
|
||||
}
|
||||
|
||||
// --------------------------------
|
||||
// planarize
|
||||
// --------------------------------
|
||||
|
||||
// print after input
|
||||
// graphPrinter(G);
|
||||
std::cout << "G Planarity: " << ogdf::isPlanar(G) << std::endl;
|
||||
std::cout << "Original number of nodes: " << G.numberOfNodes() << std::endl;
|
||||
std::cout << "Original number of edges: " << G.numberOfEdges() << std::endl;
|
||||
// store the deleted edges to be used to delete edges from G
|
||||
List<edge> *delEdges = new List<edge>;
|
||||
|
||||
// separator for planarization
|
||||
// <-------------->
|
||||
|
||||
// PQ implementation to make planar subgraph
|
||||
std::cout << "start planarization" << std::endl;
|
||||
List<edge> *delEdges = new List<edge>; // empty list
|
||||
auto start = std::chrono::high_resolution_clock::now();
|
||||
|
||||
std::cout << "running maximum" << std::endl;
|
||||
// perform planarization by ILP
|
||||
ogdf::MaximumPlanarSubgraph<int> mps;
|
||||
mps.call(G, *delEdges);
|
||||
|
||||
auto end = std::chrono::high_resolution_clock::now();
|
||||
auto microseconds = std::chrono::duration_cast<std::chrono::microseconds>(end - start).count();
|
||||
double time = static_cast<double>(microseconds) / 1'000'000.0;
|
||||
|
||||
|
||||
// --------------------------------
|
||||
// print out result of planarization
|
||||
// --------------------------------
|
||||
|
||||
std::cout << "Edges removed:" << delEdges->size() << std::endl;
|
||||
|
||||
|
||||
// delete removed edges
|
||||
for (edge e: *delEdges) {
|
||||
// print removed edges
|
||||
// std::cout << e->adjSource() << std::endl;
|
||||
G.delEdge(e);
|
||||
}
|
||||
|
||||
|
||||
// write processed graph to new gml file
|
||||
// GraphIO::write(G, "output.gml", GraphIO::writeGML);
|
||||
|
||||
|
||||
std::cout << "G planarity: " << ogdf::isPlanar(G) << std::endl;
|
||||
std::cout << "Original number of nodes: " << G.numberOfNodes() << std::endl;
|
||||
std::cout << "Subgraph number of edges: " << G.numberOfEdges() << std::endl;
|
||||
|
||||
int removed_edges = delEdges->size();
|
||||
string filename = std::filesystem::path(input_file).stem();
|
||||
std::cout << filename << ", " << removed_edges << ", " << time << std::endl;
|
||||
|
||||
return 0;
|
||||
}
|
||||
|
|
|
@ -1,14 +1,14 @@
|
|||
/*
|
||||
/* Maximum Planar Subgraph by PQ tree-based planarity test
|
||||
*
|
||||
*/
|
||||
|
||||
#include <ogdf/basic/STNumbering.h>
|
||||
#include <ogdf/fileformats/GraphIO.h>
|
||||
|
||||
#include <ogdf/planarity/PlanarSubgraphFast.h>
|
||||
// #include <ogdf/planarity/PlanarSubgraphBoyerMyrvold.h>
|
||||
#include <ogdf/planarity/MaximumPlanarSubgraph.h>
|
||||
#include <ogdf/planarity/MaximalPlanarSubgraphSimple.h>
|
||||
|
||||
#include <filesystem>
|
||||
#include <chrono>
|
||||
#include <iostream>
|
||||
|
||||
using namespace ogdf;
|
||||
|
@ -17,10 +17,10 @@ using namespace ogdf;
|
|||
int main(int argc, char* argv[])
|
||||
{
|
||||
|
||||
string inputFile = argv[1];
|
||||
string input_file = argv[1];
|
||||
Graph G;
|
||||
|
||||
if (!GraphIO::read(G, inputFile, GraphIO::readGML)) {
|
||||
if (!GraphIO::read(G, input_file, GraphIO::readGML)) {
|
||||
std::cerr << "Could not read input.gml" << std::endl;
|
||||
return 1;
|
||||
}
|
||||
|
@ -30,44 +30,29 @@ int main(int argc, char* argv[])
|
|||
computeSTNumbering(G, numbering, nullptr, nullptr, true);
|
||||
OGDF_ASSERT(num == G.numberOfNodes());
|
||||
|
||||
// print after input
|
||||
// graphPrinter(G);
|
||||
// std::cout << "G Planarity: " << ogdf::isPlanar(G) << std::endl;
|
||||
// std::cout << "Original number of nodes: " << G.numberOfNodes() << std::endl;
|
||||
// std::cout << "Original number of edges: " << G.numberOfEdges() << std::endl;
|
||||
// --------------------------------
|
||||
// planarize
|
||||
// --------------------------------
|
||||
|
||||
// separator for planarization
|
||||
// <-------------->
|
||||
|
||||
// PQ implementation to make planar subgraph
|
||||
List<edge> *delEdges = new List<edge>; // empty list
|
||||
|
||||
auto start = std::chrono::high_resolution_clock::now();
|
||||
|
||||
PlanarSubgraphFast<int> psf;
|
||||
// comment out to use default options
|
||||
// psf.runs(1);
|
||||
ogdf::MaximalPlanarSubgraphSimple<int> mps(psf);
|
||||
mps.call(G, *delEdges);
|
||||
|
||||
auto end = std::chrono::high_resolution_clock::now();
|
||||
auto microseconds = std::chrono::duration_cast<std::chrono::microseconds>(end - start).count();
|
||||
double time = static_cast<double>(microseconds) / 1'000'000.0;
|
||||
|
||||
// --------------------------------
|
||||
// print out result of planarization
|
||||
// --------------------------------
|
||||
|
||||
// print edges removed
|
||||
std::cout << delEdges->size() << std::endl;
|
||||
|
||||
|
||||
// delete removed edges
|
||||
// for (edge e: *delEdges) {
|
||||
// // print removed edges
|
||||
// // std::cout << e->adjSource() << std::endl;
|
||||
// G.delEdge(e);
|
||||
// }
|
||||
|
||||
|
||||
// write processed graph to new gml file
|
||||
// GraphIO::write(G, "output.gml", GraphIO::writeGML);
|
||||
|
||||
|
||||
// std::cout << "G planarity: " << ogdf::isPlanar(G) << std::endl;
|
||||
// std::cout << "Original number of nodes: " << G.numberOfNodes() << std::endl;
|
||||
// std::cout << "Subgraph number of edges: " << G.numberOfEdges() << std::endl;
|
||||
int removed_edges = delEdges->size();
|
||||
string filename = std::filesystem::path(input_file).stem();
|
||||
std::cout << filename << ", " << removed_edges << ", " << time << std::endl;
|
||||
|
||||
|
||||
return 0;
|
||||
|
|
|
@ -0,0 +1,2 @@
|
|||
100*
|
||||
make_scale_free_graph
|
|
@ -0,0 +1,30 @@
|
|||
#!/bin/bash
|
||||
|
||||
# Define the parameters
|
||||
num_node_range=(100 1000 10000)
|
||||
edge_multiplier_range=(2 3 5 10 20)
|
||||
copies=20
|
||||
seed=41
|
||||
|
||||
max_jobs=2
|
||||
running_jobs=0
|
||||
|
||||
# Loop through different parameters
|
||||
for num_node in "${num_node_range[@]}"; do
|
||||
for edge_multiplier in "${edge_multiplier_range[@]}"; do
|
||||
num_edge=$((num_node * edge_multiplier))
|
||||
output_folder="${num_node}n${num_edge}e"
|
||||
mkdir -p $output_folder
|
||||
|
||||
# Run the program with the parameters
|
||||
echo "run with $num_node nodes and $num_edge edges output to $output_folder"
|
||||
./make_scale_free_graph $num_node $num_edge $copies $seed $output_folder &
|
||||
|
||||
((running_jobs++))
|
||||
|
||||
if ((running_jobs >= max_jobs)); then
|
||||
wait
|
||||
running_jobs=0
|
||||
fi
|
||||
done
|
||||
done
|
|
@ -0,0 +1,2 @@
|
|||
100*
|
||||
make_regular_graph
|
|
@ -0,0 +1,30 @@
|
|||
#!/bin/bash
|
||||
|
||||
# Define the parameters
|
||||
num_node_range=(100 1000 10000)
|
||||
edge_multiplier_range=(2 3 5 10 20)
|
||||
copies=20
|
||||
seed=41
|
||||
|
||||
max_jobs=2
|
||||
running_jobs=0
|
||||
|
||||
# Loop through different parameters
|
||||
for num_node in "${num_node_range[@]}"; do
|
||||
for edge_multiplier in "${edge_multiplier_range[@]}"; do
|
||||
num_edge=$((num_node * edge_multiplier))
|
||||
output_folder="${num_node}n${num_edge}e"
|
||||
mkdir -p $output_folder
|
||||
|
||||
# Run the program with the parameters
|
||||
echo "run with $num_node nodes and $num_edge edges output to $output_folder"
|
||||
./make_regular_graph $num_node $num_edge $copies $seed $output_folder &
|
||||
|
||||
((running_jobs++))
|
||||
|
||||
if ((running_jobs >= max_jobs)); then
|
||||
wait
|
||||
running_jobs=0
|
||||
fi
|
||||
done
|
||||
done
|
Loading…
Reference in New Issue